Stem-loop mes-MIR477j

Accession

MI0037909

Description

Manihot esculenta mes-MIR477j precursor miRNA

Literature search

3 open access papers mention mes-MIR477j
(6 sentences)

Sequence

uaauuaagaauggcagccauuguucACUCUCCCUAAAGGCUUCAACcaauuuguggacuacacaaagcuugaugccuuaagggagaguggauaaaagcugucaugauuuuugcua
.........((((((((..(((((((((((((((.(((((.((((....((((((.....))))))..)))).))))).)))))))))))))))..))))))))...........

Structure

--uaauuaaga        ca               A     U    Ccaa      g 
           auggcagc  uuguucACUCUCCCU AAGGC UCAA    uuugug a
           ||||||||  ||||||||||||||| ||||| ||||    |||||| c
           uacugucg  aauaggugagaggga uuccg aguu    aaacac u
aucguuuuuag        aa               a     u    --cg      a 

Annotation confidence Not enough data

Genome context

scaffold03581: 762703-762817 [-]

Mature mes-miR477j

• Accession: MIMAT0045973
• Description: Manihot esculenta mes-miR477j mature miRNA
• Sequence: 26 - ACUCUCCCUAAAGGCUUCAAC - 46
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85