Stem-loop mes-MIR2118

Accession

MI0037911

Description

Manihot esculenta mes-MIR2118 precursor miRNA

Literature search

3 open access papers mention mes-MIR2118
(19 sentences)

Sequence

gauuaagccucccagaugcagaguggaaauggguggaugggagugaaauuuaaagagucuggugauagaaaucGUUCCCAUGCCACCCAUUUCUAuucuuucuggggguuucucccuuuu
....(((((.((((((...(((((((((((((((((((((((((((...........((((....))))..)))))))))).))))))))))))))))).))))))))))).........

Structure

-----gauu     u      ugc                 -          aauuuaaagag    g 
         aagcc cccaga   agaguggaaaugggugg augggaguga           ucug u
         ||||| ||||||   ||||||||||||||||| ||||||||||           ||||  
         uuugg gggucu   ucuuAUCUUUACCCACC UACCCUUGcu           agau g
uuuucccuc     -      --u                 G          ---------aa    a 

Annotation confidence Not enough data

Genome context

scaffold08359: 1293624-1293743 [+]

Mature mes-miR2118

• Accession: MIMAT0045975
• Description: Manihot esculenta mes-miR2118 mature miRNA
• Sequence: 74 - GUUCCCAUGCCACCCAUUUCUA - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85