Stem-loop mes-MIR11891

Accession

MI0037923

Description

Manihot esculenta mes-MIR11891 precursor miRNA

Literature search

1 open access papers mention mes-MIR11891
(3 sentences)

Sequence

uuucacuucaagaucuauacuuuaauuuaugucaaaauaauauauuguaauauugcaccguuaauaaauaacaacaauuucuagauacccuuagaaauauugaccuacauaucauaucucaagguacuauucugaCAUAAAUUGAACUAUAGACCuugaagugaa
.(((((((((((.((((((.((((((((((((((.((((.(((.(((..((((((....(((((((...........(((((((......))))))))))))))...))....))))..))).))).)))).)))))))))))))).)))))).)))))))))))

Structure

u           a      c              a    a   a   ua    ----  cacc       aauaacaacaa       au 
 uucacuucaag ucuaua uuuaauuuauguca aaua uau uug  auau    ug    guuaaua           uuucuag  a
 ||||||||||| |||||| |||||||||||||| |||| ||| |||  ||||    ||    |||||||           |||||||   
 aagugaaguuC AGAUAU AAGUUAAAUACagu uuau aug aac  uaua    ac    caguuau           aaagauu  c
-           C      C              c    c   g   uc    cuau  -auc       -----------       cc 

Annotation confidence Not enough data

Genome context

scaffold01045: 30015-30179 [+]

Mature mes-miR11891

• Accession: MIMAT0045987
• Description: Manihot esculenta mes-miR11891 mature miRNA
• Sequence: 136 - CAUAAAUUGAACUAUAGACC - 155
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85