Stem-loop aae-mir-11893-1

Accession

MI0037925

Description

Aedes aegypti aae-mir-11893-1 precursor miRNA

Literature search

1 open access papers mention aae-mir-11893-1
(1 sentences)

Sequence

23987 reads, 142.0 reads per million, 81 experiments

gaugGUAAGUAGAUAAAUCAGAAAGAcguuuauaucguuucUUCCUGACUUAUACGCUUACCUc
...(((((((..((((.((((.((((((.......))..)))).)))).))))..)))))))..

Structure

gau       AG    A    A    --  uu 
   gGUAAGU  AUAA UCAG AAGA  cg  u
   |||||||  |||| |||| ||||  ||  a
   CCAUUCG  UAUU AGUC UUcu  gc  u
-cU       CA    C    C    uu  ua 

Annotation confidence High

Genome context

ref|NW_001810392.1|: 420374-420437 [+]

Mature aae-miR-11893-5p

• Accession: MIMAT0057369
• Description: Aedes aegypti aae-miR-11893-5p mature miRNA
• Sequence: 5 - GUAAGUAGAUAAAUCAGAAAGA - 26
• Evidence: experimental ; Illumina [1]

Mature aae-miR-11893-3p

• Accession: MIMAT0045989
• Description: Aedes aegypti aae-miR-11893-3p mature miRNA
• Sequence: 42 - UUCCUGACUUAUACGCUUACCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26914027
   Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
   Miesen P, Ivens A, Buck AH, van Rij RP
   PLoS Negl Trop Dis (2016) 10:e0004452