Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs |
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|---|---|
| PubMed ID | 26914027 |
| Authors | Miesen P, Ivens A, Buck AH, van Rij RP |
| Journal | PLoS Negl Trop Dis |
| Volume | 10 |
| Pages | e0004452 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| aae-mir-11893-1 | MI0037925 | 322 | ref|NW_001810392.1| | 420374 | 420437 | + | High |
| aae-mir-11893-2 | MI0037926 | 322 | ref|NW_001810392.1| | 394984 | 395046 | + | High |
| aae-mir-11894a-1 | MI0037927 | 909 | ref|NW_001837092.1| | 9183 | 9247 | + | High |
| aae-mir-11894a-2 | MI0037928 | 909 | ref|NW_001837092.1| | 7731 | 7795 | + | High |
| aae-mir-11894a-3 | MI0037929 | 904 | ref|NW_001810838.1| | 626320 | 626384 | - | High |
| aae-mir-11894b-1 | MI0037930 | 52 | ref|NW_001837092.1| | 10435 | 10499 | + | High |
| aae-mir-11894b-2 | MI0037931 | 52 | ref|NW_001810838.1| | 627560 | 627624 | - | High |
| aae-mir-11895-1 | MI0037932 | 1913 | ref|NW_001810864.1| | 1788475 | 1788540 | + | High |
| aae-mir-11895-2 | MI0037933 | 1913 | ref|NW_001811125.1| | 819999 | 820064 | - | High |
| aae-mir-10365 | MI0037934 | 14 | ref|NW_001811375.1| | 576225 | 576303 | - | High |
| aae-mir-11896 | MI0037935 | 41 | ref|NW_001811263.1| | 1745834 | 1745899 | + | Medium |
| aae-mir-11897a | MI0037936 | 0 | ref|NW_001836509.1| | 4560 | 4620 | - | High |
| aae-mir-11898 | MI0037937 | 0 | ref|NW_001811123.1| | 969694 | 969757 | + | - |
| aae-mir-11897b | MI0037938 | 11 | ref|NW_001811041.1| | 2433926 | 2433986 | - | High |
| aae-mir-11899-1 | MI0037939 | 0 | ref|NW_001810293.1| | 67709 | 67778 | - | High |
| aae-mir-11899-2 | MI0037940 | 0 | ref|NW_001811294.1| | 126317 | 126386 | + | High |
| aae-mir-11900 | MI0037941 | 102 | ref|NW_001810947.1| | 1561004 | 1561089 | - | High |
| aae-mir-11901 | MI0037942 | None | ref|NW_001811668.1| | 342918 | 342979 | + | Medium |
| aae-mir-11902 | MI0037943 | 1 | ref|NW_001811474.1| | 1610978 | 1611038 | + | Low |
| aae-mir-11903a | MI0037944 | 0 | ref|NW_001811223.1| | 464268 | 464336 | - | - |
| aae-mir-11904 | MI0037945 | None | ref|NW_001811106.1| | 580333 | 580397 | + | - |
| aae-mir-11905 | MI0037946 | 0 | ref|NW_001810242.1| | 906239 | 906308 | - | - |
| aae-mir-11906 | MI0037947 | None | ref|NW_001811260.1| | 749296 | 749354 | + | - |
| aae-mir-11907 | MI0037948 | 4 | ref|NW_001810459.1| | 1335652 | 1335714 | + | - |
| aae-mir-11908-1 | MI0037949 | 0 | ref|NW_001811463.1| | 443558 | 443630 | - | - |
| aae-mir-11908-2 | MI0037950 | 0 | ref|NW_001811008.1| | 1291412 | 1291480 | - | - |
| aae-mir-11909-1 | MI0037951 | 0 | ref|NW_001811573.1| | 934641 | 934721 | - | - |
| aae-mir-11909-2 | MI0037952 | 0 | ref|NW_001811141.1| | 1367902 | 1367981 | - | - |
| aae-mir-11910 | MI0037953 | None | ref|NW_001811240.1| | 2047648 | 2047727 | + | - |
| aae-mir-11911 | MI0037954 | 7 | ref|NW_001811673.1| | 2726019 | 2726076 | + | High |
| aae-mir-11912 | MI0037955 | 1 | ref|NW_001810436.1| | 974381 | 974431 | - | Medium |
| aae-mir-11913 | MI0037956 | 0 | ref|NW_001810174.1| | 85841 | 85923 | + | - |
| aae-mir-11914-1 | MI0037957 | None | ref|NW_001810893.1| | 1335169 | 1335227 | + | - |
| aae-mir-11914-2 | MI0037958 | None | ref|NW_001810888.1| | 1778750 | 1778808 | - | - |
| aae-mir-11914-3 | MI0037959 | None | ref|NW_001811024.1| | 1298961 | 1299019 | + | - |
| aae-mir-11903b | MI0037960 | 0 | ref|NW_001811465.1| | 403297 | 403363 | + | - |
| aae-mir-11915 | MI0037961 | 1 | ref|NW_001810056.1| | 1296985 | 1297045 | - | - |
| aae-mir-11916 | MI0037962 | 0 | ref|NW_001811703.1| | 285766 | 285849 | - | - |
| aae-mir-11917 | MI0037963 | 18 | ref|NW_001810189.1| | 1523344 | 1523409 | + | Medium |
| aae-mir-11918 | MI0037964 | 4 | ref|NW_001810361.1| | 1291074 | 1291141 | - | High |
| aae-mir-11919 | MI0037965 | 6 | ref|NW_001810923.1| | 964752 | 964816 | - | - |
| aae-mir-11920-1 | MI0037966 | 0 | ref|NW_001810458.1| | 2615844 | 2615907 | + | - |
| aae-mir-11920-2 | MI0037967 | 0 | ref|NW_001811176.1| | 390670 | 390733 | - | - |
| aae-mir-11920-3 | MI0037968 | 0 | ref|NW_001811229.1| | 557674 | 557737 | + | - |
| aae-mir-11920-4 | MI0037969 | 0 | ref|NW_001811236.1| | 473977 | 474040 | + | - |
| aae-mir-11921 | MI0037970 | 4 | ref|NW_001811062.1| | 1278976 | 1279043 | + | - |
| aae-mir-11922 | MI0037971 | 0 | ref|NW_001811298.1| | 468132 | 468202 | + | - |
| aae-mir-11923 | MI0037972 | 0 | ref|NW_001810881.1| | 213092 | 213154 | - | - |
| aae-mir-11924 | MI0037973 | 116 | ref|NW_001811415.1| | 493001 | 493081 | - | Medium |
| aae-mir-11925 | MI0037974 | None | ref|NW_001810499.1| | 201695 | 201784 | - | - |
| aae-mir-11926-1 | MI0037975 | 3 | ref|NW_001811360.1| | 541793 | 541862 | - | Medium |
| aae-mir-11926-2 | MI0037976 | 3 | ref|NW_001810837.1| | 2803779 | 2803847 | - | Medium |
| aae-mir-11927 | MI0037977 | None | ref|NW_001811761.1| | 2388288 | 2388365 | - | - |
| aae-mir-11928 | MI0037978 | 0 | ref|NW_001810858.1| | 177862 | 177950 | - | - |
| aae-mir-1 | MI0013455 | 530586 | ref|NW_001811588.1| | 291326 | 291401 | + | High |
| aae-mir-2940 | MI0013489 | 4022 | ref|NW_001810888.1| | 643957 | 644065 | + | High |