miRBase entry: aae-mir-11901

Stem-loop aae-mir-11901


Accession
MI0037942
Description
Aedes aegypti aae-mir-11901 precursor miRNA


Sequence

246 reads, 3.0 reads per million, 60 experiments
aaaCAUCACAGAAUUGUUUUUACUGauaaggaacuaugUGUAAAAAUAAUUCUGUAAAGUuu
((((...((((((((((((((((..(((......)))..))))))))))))))))...))))

Structure
    AUC                UG   ag 
aaaC   ACAGAAUUGUUUUUAC  aua  g
||||   ||||||||||||||||  |||   
uuUG   UGUCUUAAUAAAAAUG  uau  a
    AAA                Ug   ca 


Annotation confidence Medium
Do you think this miRNA is real?

Genome context
ref|NW_001811668.1|: 342918-342979 [+]

Database links

Mature aae-miR-11901-5p

Accession MIMAT0046000
Description Aedes aegypti aae-miR-11901-5p mature miRNA
Sequence 4 - CAUCACAGAAUUGUUUUUACUG - 25
Evidence experimental
Illumina [1]

Mature aae-miR-11901-3p

Accession MIMAT0057380
Description Aedes aegypti aae-miR-11901-3p mature miRNA
Sequence 39 - UGUAAAAAUAAUUCUGUAAAGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452