miRBase entry: aae-mir-11894b-2

Stem-loop aae-mir-11894b-2


Accession
MI0037931
Description
Aedes aegypti aae-mir-11894b-2 precursor miRNA


Sequence

30652 reads, 208.0 reads per million, 83 experiments
gaugGGUCGUAUUGAAAUGGUAAAGAgugucaaucaucaucUUUACCAUUUCAAUAUGACCUAuu
(((((((((((((((((((((((((((((.....)))..))))))))))))))))))))))))))

Structure
                          --   u 
gaugGGUCGUAUUGAAAUGGUAAAGA  gug c
||||||||||||||||||||||||||  ||| a
uuAUCCAGUAUAACUUUACCAUUUcu  uac a
                          ac   u 


Annotation confidence High
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Genome context
ref|NW_001810838.1|: 627560-627624 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aae-mir-11894b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aae-miR-11894b-2-5p

Accession MIMAT0057373
Description Aedes aegypti aae-miR-11894b-2-5p mature miRNA
Sequence 5 - GGUCGUAUUGAAAUGGUAAAGA - 26
Evidence experimental
Illumina [1]

Mature aae-miR-11894b-3p

Accession MIMAT0045991
Description Aedes aegypti aae-miR-11894b-3p mature miRNA
Sequence 42 - UUUACCAUUUCAAUAUGACCUA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452