miRBase entry: aae-mir-11900

Stem-loop aae-mir-11900


Accession
MI0037941
Description
Aedes aegypti aae-mir-11900 precursor miRNA


Sequence

33994 reads, 248.0 reads per million, 81 experiments
augGUAAAAUUACGUUGAAAAAUCGUCUcccucaaaaaaugaaaccugagacuaacaggagAUUUUUUUGACUGUAAUUUUAUAGu
...(((((((((((((((((((..((((((((((............)))).......))))))))))))))).))))))))))...

Structure
aug          -         UC      -------    aaaaa 
   GUAAAAUUAC GUUGAAAAA  GUCUcc       cuca     u
   |||||||||| |||||||||  ||||||       ||||      
   UAUUUUAAUG CAGUUUUUU  UAgagg       gagu     g
uGA          U         --      acaauca    ccaaa 


Annotation confidence High
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Genome context
ref|NW_001810947.1|: 1561004-1561089 [-]

Database links

Mature aae-miR-11900-5p

Accession MIMAT0057379
Description Aedes aegypti aae-miR-11900-5p mature miRNA
Sequence 4 - GUAAAAUUACGUUGAAAAAUCGUCU - 28
Evidence experimental
Illumina [1]

Mature aae-miR-11900-3p

Accession MIMAT0045999
Description Aedes aegypti aae-miR-11900-3p mature miRNA
Sequence 62 - AUUUUUUUGACUGUAAUUUUAUAG - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452