Stem-loop aae-mir-11894b-1

Accession

MI0037930

Description

Aedes aegypti aae-mir-11894b-1 precursor miRNA

Literature search

1 open access papers mention aae-mir-11894b-1
(1 sentences)

Sequence

30785 reads, 207.0 reads per million, 83 experiments

gaugGGUCGUCUUGAAAUGGGAAAGAgugucaaucaucaucUUUACCAUUUCAAUAUGACCUAuu
((((((((((.(((((((((..(((((((.....)))..))))..))))))))).))))))))))

Structure

          C         GA    --   u 
gaugGGUCGU UUGAAAUGG  AAGA  gug c
|||||||||| |||||||||  ||||  ||| a
uuAUCCAGUA AACUUUACC  UUcu  uac a
          U         AU    ac   u 

Annotation confidence High

Genome context

ref|NW_001837092.1|: 10435-10499 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from aae-mir-11894b-1

Mature aae-miR-11894b-1-5p

• Accession: MIMAT0057372
• Description: Aedes aegypti aae-miR-11894b-1-5p mature miRNA
• Sequence: 5 - GGUCGUCUUGAAAUGGGAAAGA - 26
• Evidence: experimental ; Illumina [1]

Mature aae-miR-11894b-3p

• Accession: MIMAT0045991
• Description: Aedes aegypti aae-miR-11894b-3p mature miRNA
• Sequence: 42 - UUUACCAUUUCAAUAUGACCUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26914027
   Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
   Miesen P, Ivens A, Buck AH, van Rij RP
   PLoS Negl Trop Dis (2016) 10:e0004452