miRBase entry: aae-mir-11918

Stem-loop aae-mir-11918


Accession
MI0037964
Description
Aedes aegypti aae-mir-11918 precursor miRNA


Sequence

1495 reads, 34.0 reads per million, 71 experiments
uauAAGUCCCGUCGUCGCCUUCAUGUGcgguggucacaugccacaCAUGAACGACGACGUGACGCCGc
.....(((.((((((((..((((((((.((((......)))).)))))))))))))))).))).....

Structure
uauAA   C        CC        c    gu 
     GUC CGUCGUCG  UUCAUGUG ggug  c
     ||| ||||||||  |||||||| ||||   
     CAG GCAGCAGC  AAGUACac ccgu  a
cGCCG   U        --        a    ac 


Annotation confidence High
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Genome context
ref|NW_001810361.1|: 1291074-1291141 [-]

Database links

Mature aae-miR-11918-5p

Accession MIMAT0057385
Description Aedes aegypti aae-miR-11918-5p mature miRNA
Sequence 4 - AAGUCCCGUCGUCGCCUUCAUGUG - 27
Evidence experimental
Illumina [1]

Mature aae-miR-11918-3p

Accession MIMAT0046018
Description Aedes aegypti aae-miR-11918-3p mature miRNA
Sequence 46 - CAUGAACGACGACGUGACGCCG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452