miRBase entry: aae-mir-11912

Stem-loop aae-mir-11912


Accession
MI0037955
Description
Aedes aegypti aae-mir-11912 precursor miRNA


Sequence

290 reads, 4.0 reads per million, 62 experiments
agcAGUGUGUGAACCGUUGGCGGCgcaaCGCCUGAUGGUAUUGAUGCUGCU
((((((((....((((((((((......)))).))))))....))))))))

Structure
        GUGA      -    GC 
agcAGUGU    ACCGUU GGCG  g
||||||||    |||||| ||||   
UCGUCGUA    UGGUAG CCGC  c
        GUUA      U    aa 


Annotation confidence Medium
Do you think this miRNA is real?

Genome context
ref|NW_001810436.1|: 974381-974431 [-]

Database links

Mature aae-miR-11912-5p

Accession MIMAT0046011
Description Aedes aegypti aae-miR-11912-5p mature miRNA
Sequence 4 - AGUGUGUGAACCGUUGGCGGC - 24
Evidence experimental
Illumina [1]

Mature aae-miR-11912-3p

Accession MIMAT0057383
Description Aedes aegypti aae-miR-11912-3p mature miRNA
Sequence 29 - CGCCUGAUGGUAUUGAUGCUGCU - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452