Stem-loop aae-mir-11894a-1

Accession

MI0037927

Description

Aedes aegypti aae-mir-11894a-1 precursor miRNA

Literature search

1 open access papers mention aae-mir-11894a-1
(1 sentences)

Sequence

241592 reads, 1898.0 reads per million, 85 experiments

gaugGGUCGUCUUGAAAUGGUAAAGAgugucaaucaucgucUUUACCAUUUCAAGAUGACCUAuu
(((((((((((((((((((((((((((((.....)))..))))))))))))))))))))))))))

Structure

                          --   u 
gaugGGUCGUCUUGAAAUGGUAAAGA  gug c
||||||||||||||||||||||||||  ||| a
uuAUCCAGUAGAACUUUACCAUUUcu  uac a
                          gc   u 

Annotation confidence High

Genome context

ref|NW_001837092.1|: 9183-9247 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from aae-mir-11894a-1

Mature aae-miR-11894a-5p

• Accession: MIMAT0057370
• Description: Aedes aegypti aae-miR-11894a-5p mature miRNA
• Sequence: 5 - GGUCGUCUUGAAAUGGUAAAGA - 26
• Evidence: experimental ; Illumina [1]

Mature aae-miR-11894a-3p

• Accession: MIMAT0045990
• Description: Aedes aegypti aae-miR-11894a-3p mature miRNA
• Sequence: 42 - UUUACCAUUUCAAGAUGACCUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26914027
   Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
   Miesen P, Ivens A, Buck AH, van Rij RP
   PLoS Negl Trop Dis (2016) 10:e0004452