Stem-loop aae-mir-10365

Accession

MI0037934

Description

Aedes aegypti aae-mir-10365 precursor miRNA

Sequence

36337 reads, 223.0 reads per million, 80 experiments

gaccAUUAGAAUGUGGAAUCUGUUUUuguacaucaaguguuacgaaacgaagcaaAAAAGUUUUCAUAUUCUUGCGGuc
((((...(((((((((((.((.(((((((...((..((........)))).))))))))).)))))))))))...))))

Structure

    AUU           U  G       aca  aa  guu 
gacc   AGAAUGUGGAA CU UUUUugu   uc  gu   a
||||   ||||||||||| || |||||||   ||  ||    
cuGG   UCUUAUACUUU GA AAAaacg   ag  ca   c
    CGU           U  -       --a  --  aag 

Annotation confidence High

Genome context

ref|NW_001811375.1|: 576225-576303 [-]

Mature aae-miR-10365-5p

• Accession: MIMAT0045993
• Description: Aedes aegypti aae-miR-10365-5p mature miRNA
• Sequence: 5 - AUUAGAAUGUGGAAUCUGUUUU - 26
• Evidence: experimental ; Illumina [1]

Mature aae-miR-10365-3p

• Accession: MIMAT0057375
• Description: Aedes aegypti aae-miR-10365-3p mature miRNA
• Sequence: 56 - AAAAGUUUUCAUAUUCUUGCGG - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26914027
   Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
   Miesen P, Ivens A, Buck AH, van Rij RP
   PLoS Negl Trop Dis (2016) 10:e0004452