miRBase entry: aae-mir-11893-2

Stem-loop aae-mir-11893-2


Accession
MI0037926
Description
Aedes aegypti aae-mir-11893-2 precursor miRNA


Sequence

24000 reads, 142.0 reads per million, 81 experiments
augGUAAGUAGAUAAAUCAGAAAGAcguuuuuaucguuucUUCCUGACUUAUACGCUUACCUc
..(((((((..((((.((((.((((((.......))..)))).)))).))))..)))))))..

Structure
au       AG    A    A    --  uu 
  gGUAAGU  AUAA UCAG AAGA  cg  u
  |||||||  |||| |||| ||||  ||  u
  CCAUUCG  UAUU AGUC UUcu  gc  u
cU       CA    C    C    uu  ua 


Annotation confidence High
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Genome context
ref|NW_001810392.1|: 394984-395046 [+]

Database links

Mature aae-miR-11893-5p

Accession MIMAT0057369
Description Aedes aegypti aae-miR-11893-5p mature miRNA
Sequence 4 - GUAAGUAGAUAAAUCAGAAAGA - 25
Evidence experimental
Illumina [1]

Mature aae-miR-11893-3p

Accession MIMAT0045989
Description Aedes aegypti aae-miR-11893-3p mature miRNA
Sequence 41 - UUCCUGACUUAUACGCUUACCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26914027
    Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
    Miesen P, Ivens A, Buck AH, van Rij RP
    PLoS Negl Trop Dis (2016) 10:e0004452