Stem-loop gmo-mir-133a-2

Accession

MI0037981

Description

Gadus morhua gmo-mir-133a-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-133a-2
(2 sentences)

Sequence

AGCUGGUAAAAUGGAACCAAAUcaacuguuaaauggauUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  U  A        aacug 
  AGCUGGU  AA GG ACCAAAUc     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUuag     u
UG       AC  C  C        guaaa 

Annotation confidence Not enough data

Genome context

HE566325.1: 8548-8607 [+]

Mature gmo-miR-133a-5p

• Accession: MIMAT0046029
• Description: Gadus morhua gmo-miR-133a-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAUGGAACCAAAU - 22
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-133a-3p

• Accession: MIMAT0046030
• Description: Gadus morhua gmo-miR-133a-3p mature miRNA
• Sequence: 39 - UUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324