Stem-loop gmo-mir-214-2

Accession

MI0037985

Description

Gadus morhua gmo-mir-214-2 precursor miRNA

Literature search

1 open access papers mention gmo-mir-214-2
(1 sentences)

Sequence

8328 reads, 135.0 reads per million, 20 experiments

UGCCUGUCUUCACUUGCUGUGcaguaauugguucagccuguACAGCAGGCACAGACAGGCAGa
(((((((((...((((((((((((...(((...))).))))))))))))...)))))))))..

Structure

--         UCA            uaa   g 
  UGCCUGUCU   CUUGCUGUGcag   uug  
  |||||||||   ||||||||||||   ||| u
  ACGGACAGA   GGACGACAuguc   gac  
aG         CAC            --c   u 

Annotation confidence High

Genome context

HE566539.1: 1051641-1051703 [+]

Mature gmo-miR-214-2-5p

• Accession: MIMAT0046035
• Description: Gadus morhua gmo-miR-214-2-5p mature miRNA
• Sequence: 1 - UGCCUGUCUUCACUUGCUGUG - 21
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-214-3p

• Accession: MIMAT0044209
• Description: Gadus morhua gmo-miR-214-3p mature miRNA
• Sequence: 42 - ACAGCAGGCACAGACAGGCAG - 62
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324