Stem-loop gmo-mir-2184

Accession

MI0037986

Description

Gadus morhua gmo-mir-2184 precursor miRNA

Sequence

92846 reads, 1462.0 reads per million, 19 experiments

AACAGUAAGAGUUUAUGUGCUGUGagcugccaucaGUACAUGACCUCUUGCAGUGCa
.((.(((((((.((((((((((((......)).)))))))))).))))))).))...

Structure

--A  A       U          -  ag 
   AC GUAAGAG UUAUGUGCUG UG  c
   || ||||||| |||||||||| ||   
   UG CGUUCUC AGUACAUGac ac  u
aCG  A       C          u  cg 

Annotation confidence High

Genome context

CAEA01109560.1: 92-148 [+]

Mature gmo-miR-2184-5p

• Accession: MIMAT0046036
• Description: Gadus morhua gmo-miR-2184-5p mature miRNA
• Sequence: 1 - AACAGUAAGAGUUUAUGUGCUGUG - 24
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-2184-3p

• Accession: MIMAT0046037
• Description: Gadus morhua gmo-miR-2184-3p mature miRNA
• Sequence: 36 - GUACAUGACCUCUUGCAGUGC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324