Stem-loop gmo-mir-2187b

Accession

MI0037987

Description

Gadus morhua gmo-mir-2187b precursor miRNA

Sequence

715 reads, 21.0 reads per million, 10 experiments

UAAUUAGUAUAGCCUGUAUUAGUgaugugaucuauucUUUACAGGCUAUGCUAAUCUau
..((((((((((((((((..((.((((.....)))))).))))))))))))))))....

Structure

--UA                UU  U    u 
    AUUAGUAUAGCCUGUA  AG gaug g
    ||||||||||||||||  || |||| a
    UAAUCGUAUCGGACAU  Uc uuau u
uaUC                -U  -    c 

Annotation confidence High

Genome context

HE566307.1: 496461-496519 [-]

Mature gmo-miR-2187b-5p

• Accession: MIMAT0046038
• Description: Gadus morhua gmo-miR-2187b-5p mature miRNA
• Sequence: 1 - UAAUUAGUAUAGCCUGUAUUAGU - 23
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-2187b-3p

• Accession: MIMAT0046039
• Description: Gadus morhua gmo-miR-2187b-3p mature miRNA
• Sequence: 38 - UUUACAGGCUAUGCUAAUCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324