Stem-loop gmo-mir-451

Accession

MI0037992

Description

Gadus morhua gmo-mir-451 precursor miRNA

Literature search

4 open access papers mention gmo-mir-451
(7 sentences)

Sequence

386908 reads, 10428.0 reads per million, 20 experiments

AAACCGUUACCAUUACUGAGUUuuuagcaaugguaaggguucc
.((((.((((((((.((((....)))).)))))))).))))..

Structure

-A    G        A    G 
  AACC UUACCAUU CUGA U
  |||| |||||||| ||||  
  uugg aaugguaa gauu U
cc    g        c    u 

Annotation confidence High

Genome context

CAEA01183658.1: 488-530 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gmo-mir-451

Mature gmo-miR-451-5p

• Accession: MIMAT0046046
• Description: Gadus morhua gmo-miR-451-5p mature miRNA
• Sequence: 1 - AAACCGUUACCAUUACUGAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324