Stem-loop gmo-mir-727b

Accession

MI0037996

Description

Gadus morhua gmo-mir-727b precursor miRNA

Sequence

UCAGUCUUCAGUUCCUCCCAGCccaugagcauggcaaaggugugUUGAGGCGAGUUGAAGACUUUA
..((((((((((((..((((((.(((..((...))....))).)))).)).))))))))))))...

Structure

-UC            CU  -    c   --ga  a 
   AGUCUUCAGUUC  CC CAGC cau    gc  
   ||||||||||||  || |||| |||    || u
   UCAGAAGUUGAG  GG GUUg gug    cg  
AUU            -C  A    u   gaaa  g 

Annotation confidence Not enough data

Genome context

CAEA01097581.1: 590-655 [-]

Mature gmo-miR-727b-5p

• Accession: MIMAT0046051
• Description: Gadus morhua gmo-miR-727b-5p mature miRNA
• Sequence: 1 - UCAGUCUUCAGUUCCUCCCAGC - 22
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-727b-3p

• Accession: MIMAT0046052
• Description: Gadus morhua gmo-miR-727b-3p mature miRNA
• Sequence: 45 - UUGAGGCGAGUUGAAGACUUUA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324