Stem-loop gmo-mir-11935

Accession

MI0038006

Description

Gadus morhua gmo-mir-11935 precursor miRNA

Sequence

ACCUGAGCUGGUCUGCAGACUagacuaggaccuaagcaggUCUCCAGACUGGACCAGGACC
.((((..((((((((.(((((.(..(((...)))..).))))).))))))))..))))...

Structure

--A    AG        C     a ac   g 
   CCUG  CUGGUCUG AGACU g  uag  
   ||||  |||||||| ||||| |  ||| a
   GGAC  GGUCAGAC UCUgg c  auc  
CCA    CA        C     a ga   c 

Annotation confidence Not enough data

Genome context

HE567306.1: 99879-99939 [+]

Mature gmo-miR-11935-5p

• Accession: MIMAT0046069
• Description: Gadus morhua gmo-miR-11935-5p mature miRNA
• Sequence: 1 - ACCUGAGCUGGUCUGCAGACU - 21
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-11935-3p

• Accession: MIMAT0046070
• Description: Gadus morhua gmo-miR-11935-3p mature miRNA
• Sequence: 41 - UCUCCAGACUGGACCAGGACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324