Stem-loop csi-MIR166g

Accession

MI0039630

Description

Citrus sinensis csi-MIR166g precursor miRNA

Literature search

7 open access papers mention csi-MIR166g
(12 sentences)

Sequence

auaucuuucuuucucucauaguugagggGAAUGCUGUCUGGUUCGAGACcauucauuugaagaauagaaaaucaucugaaugaUCUCGGACCAGGCUUCAUUCCccccaacaagguguguuuuaccauucaauu
....................((((.((((((((..(((((((((((((.((((((..(((...........)))..)))))).)))))))))))))..)))))))).))))..((((.....))))........

Structure

---auaucuuucuuucucucaua    a        CU             C      uu   agaa 
                       guug gggGAAUG  GUCUGGUUCGAGA cauuca  uga    u
                       |||| ||||||||  ||||||||||||| ||||||  |||    a
                       caac ccCCUUAC  CGGACCAGGCUCU guaagu  acu    g
uuaacuuaccauuuuguguggaa    c        UU             a      cu   aaaa 

Annotation confidence Not enough data

Genome context

chr9: 5710567-5710700 [-]

Mature csi-miR166g-5p

• Accession: MIMAT0048878
• Description: Citrus sinensis csi-miR166g-5p mature miRNA
• Sequence: 29 - GAAUGCUGUCUGGUUCGAGAC - 49
• Evidence: experimental ; Illumina [1]

Mature csi-miR166g-3p

• Accession: MIMAT0048879
• Description: Citrus sinensis csi-miR166g-3p mature miRNA
• Sequence: 84 - UCUCGGACCAGGCUUCAUUCC - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113