Stem-loop csi-MIR166i

Accession

MI0039632

Description

Citrus sinensis csi-MIR166i precursor miRNA

Literature search

7 open access papers mention csi-MIR166i
(12 sentences)

Sequence

aaguugagaggaauguugucugacucaagaucauggaggaagaauaaauauaugagcccuaaauuauUCUUGGACCAGGCUUCAUUCCacuaaaccaacu
.(((((((.((((((..(((((..((((((..((..(((....(((....)))....)))..))...))))))..)))))..)))))).))....)))))

Structure

a     ----  a      uu     ac      -uc  gg   aaga   a 
 aguug    ag ggaaug  gucug  ucaaga   au  agg    aua a
 |||||    || ||||||  |||||  ||||||   ||  |||    |||  
 ucaac    uc CCUUAC  CGGAC  GGUUCU   ua  ucc    uau u
-     caaa  a      UU     CA      uau  aa   cgag   a 

Annotation confidence Not enough data

Genome context

JH999128.1: 611296-611395 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from csi-MIR166i

Mature csi-miR166i-3p

• Accession: MIMAT0048881
• Description: Citrus sinensis csi-miR166i-3p mature miRNA
• Sequence: 68 - UCUUGGACCAGGCUUCAUUCC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113