Stem-loop csi-MIR394b

Accession

MI0039662

Description

Citrus sinensis csi-MIR394b precursor miRNA

Literature search

4 open access papers mention csi-MIR394b
(11 sentences)

Sequence

cagagucauuUUGGCAUUCUGUCCACCUCCguuaauucuuuucuuuuuugcccacuugaaaucuuagauuuggagguggcuagcaugccuaacaggcucugu
(((((((.....(((((.(((.(((((((((........((((..............)))).........))))))))).))).))))).....))))))).

Structure

-       auuUU     U   U         -uuaauucu    uuuuuu 
 cagaguc     GGCAU CUG CCACCUCCg         uuuc      g
 |||||||     ||||| ||| |||||||||         ||||       
 gucucgg     ccgua gau gguggaggu         aaag      c
u       acaau     c   c         uuagauucu    uucacc 

Annotation confidence Not enough data

Genome context

JH999157.1: 292152-292253 [-]

Mature csi-miR394b-5p

• Accession: MIMAT0048923
• Description: Citrus sinensis csi-miR394b-5p mature miRNA
• Sequence: 11 - UUGGCAUUCUGUCCACCUCC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113