Accession
MI0039681
Description
Citrus sinensis
csi-MIR3627b precursor miRNA
Sequence
gggucauaagcaggagacauacgcaacaacgacagagcuuaauuagcacaaaagugaggaaaaauuauaaaggaaaguaaucgaagccaagccaaggccugcaugaauuuuaaggcaagcacaugcuagaaaaagaaauuaaaagaaguucaggggcucUUGUCGCAGGAGCGUUGGCACCugcaccggccaccguguguauguggugucgcaagugccagcauccugugacaagaagcccuaaaacuucuucgcucacauuuuu
.((((....(((((.(.(..((((..(..(((((((((((......(((....))).......(((((........)))))....(((.......)))(((.((...((((((((((......))))...........))))))...)).))))))))).)))))..)..))))..)).)))))...))))...(((((...(((((((((((.(((....)))..)))))))(((((........))))))))).)))))....
.((((....(((((.(.(..((((..(..(((((((((((......(((....))).......(((((........)))))....(((.......)))(((.((...((((((((((......))))...........))))))...)).))))))))).)))))..)..))))..)).)))))...))))...(((((...(((((((((((.(((....)))..)))))))(((((........))))))))).)))))....
Structure
-------------------------------------------------------------------------g auaa a a au aa aa - aauuagcacaaaagugaggaaaaauuauaaaggaaaguaaucgaagccaagccaa
gguc gcagg g c acgc c cgaca gagcuu g
|||| ||||| | | |||| | ||||| |||||| g
ccgg cguCC C G UGCG G GCUGU cucggg c
uuuuuacacucgcuucuucaaaaucccgaagaacaguguccuacgaccgugaacgcugugguguaugugugcca -cca A - GU AG AC U gacuugaagaaaauuaaagaaaaagaucguacacgaacggaauuuuaaguacguc
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr6: 19944464-19944728 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from csi-MIR3627b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature csi-miR3627b-3p
| Accession | MIMAT0048955 |
| Description | Citrus sinensis csi-miR3627b-3p mature miRNA |
| Sequence | 160 - UUGUCGCAGGAGCGUUGGCACC - 181 |
| Evidence |
experimental
Illumina [1] |
References
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