Accession
MI0039682
Description
Citrus sinensis
csi-MIR3627c precursor miRNA
Sequence
59244
reads,
1368.0
reads per million, 16 experiments
aauuaaauauagaaaguuggggcacuuauaUCGCAGGGGAGAUGGGACCAACUgcagccgcuagguagcagcCGGUGCCAUCCUCCUGCGAUAugagaacccuccaacuuacucuuguccaaa
..........((.(((((((((..(((((((((((((((.(((((.(((..((((.(((....))).))))..))).))))))))))))))))))))....))))))))).))..........
..........((.(((((((((..(((((((((((((((.(((((.(((..((((.(((....))).))))..))).))))))))))))))))))))....))))))))).))..........
Structure
aauuaaauau a --ca A G AA a g
ag aaguugggg cuuauaUCGCAGGGG GAUGG ACC CUgc gcc c
|| ||||||||| ||||||||||||||| ||||| ||| |||| |||
uc uucaaccuc gaguAUAGCGUCCUC CUACC UGG gacg ugg u
aaaccuguuc a ccaa - G Cc a a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr6: 19939025-19939147 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from csi-MIR3627c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature csi-miR3627c-5p
| Accession | MIMAT0048956 |
| Description | Citrus sinensis csi-miR3627c-5p mature miRNA |
| Sequence | 31 - UCGCAGGGGAGAUGGGACCAACU - 53 |
| Evidence |
experimental
Illumina [1] |
Mature csi-miR3627c-3p
| Accession | MIMAT0057192 |
| Description | Citrus sinensis csi-miR3627c-3p mature miRNA |
| Sequence | 73 - CGGUGCCAUCCUCCUGCGAUA - 93 |
| Evidence |
experimental
unknown |
References
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