Accession
MI0039686
Description
Citrus sinensis
csi-MIR3954b precursor miRNA
Sequence
6665181
reads,
99279.0
reads per million, 16 experiments
uauuauuuugcuuugguuuggucuguuuacaaagugagaaaaucacuuucguuguucguuguuagaaaaaaauaugaucaauuauauuuguUUGGACAGAGAAAUCACGGUCAUgagaugaguuuucuaaucuguacuguaaucuguauacggugauggugaauauugacgauggauucucuuucuACCGUGUUUCUCUGCCCAAUCAGAUauauuugaucuucauuccauuucugu
.............(((..(((.......(((((((((.....))))))).))..(((.......)))........((((((.((((((((.((((.((((((((.((((((...((((.(((..(((..(((..(((((((.......)))))))..))).............)))..))))))).)))))))))))))).)))).)))))))).)))))).)))..))).......
.............(((..(((.......(((((((((.....))))))).))..(((.......)))........((((((.((((((((.((((.((((((((.((((((...((((.(((..(((..(((..(((((((.......)))))))..))).............)))..))))))).)))))))))))))).)))).)))))))).)))))).)))..))).......
Structure
uauuauuuugcuu uu ucuguuuacaaagugagaaaaucacuuucguuguucguuguuagaaaaaaauau u u A U CAU u uu -----------ua ug au
ugg ugg gaucaa uauauuug UUGG CAGAGAAA CACGGU gaga gag uuc auc uacugua c
||| ||| |||||| |||||||| |||| |||||||| |||||| |||| ||| ||| ||| ||||||| u
acc acu cuaguu auaUAGAC AACC GUCUCUUU GUGCCA cuuu cuc agg ugg guggcau g
------ugucuuu uu -----------------------------------------------------u u U C - --u - uu uagcaguuauaag ua au
Annotation confidence
Medium
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Genome context
chr9: 5824724-5824960 [-]
Database links
Mature csi-miR3954b-5p
| Accession | MIMAT0048963 |
| Description | Citrus sinensis csi-miR3954b-5p mature miRNA |
| Sequence | 92 - UUGGACAGAGAAAUCACGGUCAU - 114 |
| Evidence |
experimental
Illumina [1] |
Mature csi-miR3954b-3p
| Accession | MIMAT0048964 |
| Description | Citrus sinensis csi-miR3954b-3p mature miRNA |
| Sequence | 187 - ACCGUGUUUCUCUGCCCAAUCAGAU - 211 |
| Evidence |
experimental
Illumina [1] |
References
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