Stem-loop csi-MIR12106

Accession

MI0039689

Description

Citrus sinensis csi-MIR12106 precursor miRNA

Sequence

cuuaaguccuGUUUAGGACAGCUGCUGCCAAAccuacauuauaggagagauuuucuccuaaaauacagguuUGGGGCAGCUGUCCUAAACGGgccuauag
....((.(((((((((((((((((((.((((((((..(((.(((((((.....))))))).)))..))))))))))))))))))))))))))).))....

Structure

cuua  u                   G        ac   a       g 
    ag ccuGUUUAGGACAGCUGCU CCAAAccu  auu uaggaga a
    || ||||||||||||||||||| ||||||||  ||| ||||||| u
    uc gGGCAAAUCCUGUCGACGG GGUuugga  uaa auccucu u
gaua  c                   -        ca   a       u 

Annotation confidence Not enough data

Genome context

chr2: 4660197-4660296 [-]

Mature csi-miR12106-5p

• Accession: MIMAT0048969
• Description: Citrus sinensis csi-miR12106-5p mature miRNA
• Sequence: 11 - GUUUAGGACAGCUGCUGCCAAA - 32
• Evidence: experimental ; Illumina [1]

Mature csi-miR12106-3p

• Accession: MIMAT0048970
• Description: Citrus sinensis csi-miR12106-3p mature miRNA
• Sequence: 72 - UGGGGCAGCUGUCCUAAACGG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113