Stem-loop csi-MIR12106

Accession

MI0039689

Description

Citrus sinensis csi-MIR12106 precursor miRNA

Sequence

746 reads, 43.0 reads per million, 16 experiments

cuuaaguccUGUUUAGGACAGCUGCUGCCAAAccuacauuauaggagagauuuucuccuaaaauACAGGUUUGGGGCAGCUGUCcuaaacgggccuauag
....((.(((((((((((((((((((.((((((((..(((.(((((((.....))))))).)))..))))))))))))))))))))))))))).))....

Structure

cuua  u                   G        ac   a       g 
    ag ccUGUUUAGGACAGCUGCU CCAAAccu  auu uaggaga a
    || ||||||||||||||||||| ||||||||  ||| ||||||| u
    uc gggcaaaucCUGUCGACGG GGUUUGGA  uaa auccucu u
gaua  c                   -        CA   a       u 

Annotation confidence Medium

Genome context

chr2: 4660197-4660296 [-]

Mature csi-miR12106-5p

• Accession: MIMAT0048969
• Description: Citrus sinensis csi-miR12106-5p mature miRNA
• Sequence: 10 - UGUUUAGGACAGCUGCUGCCAAA - 32
• Evidence: experimental ; Illumina [1]

Mature csi-miR12106-3p

• Accession: MIMAT0048970
• Description: Citrus sinensis csi-miR12106-3p mature miRNA
• Sequence: 65 - ACAGGUUUGGGGCAGCUGUC - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113