Stem-loop csi-MIR9560

Accession

MI0039696

Description

Citrus sinensis csi-MIR9560 precursor miRNA

Sequence

caaggugugauucugaaugcACAGGAGGUGGAACAAAUAUGAAAuuuucauugaaauUCAUAUUUGCUCCACCACCUGUGGauucaaauucagccuuagagau
.(((((.(((...(((((.((((((.((((((.((((((((((.(((.....))).)))))))))).)))))).)))))).)))))...))))))))......

Structure

-----c     g   uuc     g      A      A          A   u 
      aaggu uga   ugaau cACAGG GGUGGA CAAAUAUGAA uuu c
      ||||| |||   ||||| |||||| |||||| |||||||||| ||| a
      uuccg acu   acuua GUGUCC CCACCU GUUUAUACUu aag u
uagaga     -   uaa     G      A      C          a   u 

Annotation confidence Not enough data

Genome context

chr3: 18990552-18990654 [-]

Mature csi-miR9560-5p

• Accession: MIMAT0048979
• Description: Citrus sinensis csi-miR9560-5p mature miRNA
• Sequence: 21 - ACAGGAGGUGGAACAAAUAUGAAA - 44
• Evidence: experimental ; Illumina [1]

Mature csi-miR9560-3p

• Accession: MIMAT0048980
• Description: Citrus sinensis csi-miR9560-3p mature miRNA
• Sequence: 58 - UCAUAUUUGCUCCACCACCUGUGG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113