Stem-loop csi-MIR156i

Accession

MI0039702

Description

Citrus sinensis csi-MIR156i precursor miRNA

Literature search

7 open access papers mention csi-MIR156i
(36 sentences)

Sequence

gaaauuuugUUGACAGAAGAUAGAUAGCACauaaauuaaaaugccauuaaucaaacgcauuuuaaaucuuugagcucucuguauuccgucaucaacgugca
......(((.((((.(((.(((((.(((.((....(((((((((............))))))))).....)).))).))))).))).)))).)))......

Structure

gaaauu   U    A   G     U   A  -uaaa         cauua 
      uug UGAC GAA AUAGA AGC Ca     uuaaaaugc     a
      ||| |||| ||| ||||| ||| ||     |||||||||      
      aac acug cuu ugucu ucg gu     aauuuuacg     u
acgugc   u    c   a     c   a  uucua         caaac 

Annotation confidence Not enough data

Genome context

chr2: 10067141-10067241 [+]

Mature csi-miR156i-5p

• Accession: MIMAT0048990
• Description: Citrus sinensis csi-miR156i-5p mature miRNA
• Sequence: 10 - UUGACAGAAGAUAGAUAGCAC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113