Stem-loop csi-MIR2111

Accession

MI0039711

Description

Citrus sinensis csi-MIR2111 precursor miRNA

Sequence

auuggugaggaucaggUAAUCUGCAUCCUGAGGUUUGgaucagcauguacguuuguuguaucuaguccucaggauacggauuaccuuauccuuacugacaauauaaaa
.(((((((((((.((((((((((.(((((((((.(((((((((((........))))).)))))).))))))))).)))))))))).)))))))))))..........

Structure

---------a           c          C         U      -     ugu 
          uuggugaggau aggUAAUCUG AUCCUGAGG UUGgau cagca   a
          ||||||||||| |||||||||| ||||||||| |||||| |||||    
          agucauuccua uccauuaggc uaggacucc gaucua guugu   c
aaaauauaac           u          a         u      u     uug 

Annotation confidence Not enough data

Genome context

chr6: 8971653-8971760 [-]

Mature csi-miR2111-5p

• Accession: MIMAT0049002
• Description: Citrus sinensis csi-miR2111-5p mature miRNA
• Sequence: 17 - UAAUCUGCAUCCUGAGGUUUG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113