Stem-loop csi-MIR169r

Accession

MI0039713

Description

Citrus sinensis csi-MIR169r precursor miRNA

Literature search

5 open access papers mention csi-MIR169r
(12 sentences)

Sequence

5371 reads, 99.0 reads per million, 16 experiments

gugCAGCCAAGGAUGACUUGCCGGcggccggaacuagcaaaggcaauucaagugcccuuauuuuccggcaaguuuaucCUUGGCUACAUUGGGCUC
(((.((((((((((((((((((((.((((.(((...((....))..)))..).)))........)))))))).)))))))))))).))).......

Structure

-------   C            -        -------c   - -g   cua  a 
       gug AGCCAAGGAUGA CUUGCCGG        ggc c  gaa   gc a
       ||| |||||||||||| ||||||||        ||| |  |||   ||  
       UAC UCGGUUCcuauu gaacggcc        ccg g  cuu   cg a
CUCGGGU   A            u        uuuuauuc   u aa   -aa  g 

Annotation confidence Not enough data

Genome context

Unknown

Mature csi-miR169r-5p

• Accession: MIMAT0049005
• Description: Citrus sinensis csi-miR169r-5p mature miRNA
• Sequence: 4 - CAGCCAAGGAUGACUUGCCGG - 24
• Evidence: experimental ; Illumina [1]

Mature csi-miR169r-3p

• Accession: MIMAT0057197
• Description: Citrus sinensis csi-miR169r-3p mature miRNA
• Sequence: 79 - CUUGGCUACAUUGGGCUC - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 28054378
   MicroRNA annotation of plant genomes - Do it right or not at all
   "Taylor RS, Tarver JE, Foroozani A, Donoghue PC"
   Bioessays (2017) 39:1600113