Stem-loop mmu-mir-12198

Accession

MI0040644

Description

Mus musculus mmu-mir-12198 precursor miRNA

Sequence

105 reads, 10.0 reads per million, 6 experiments

agagcacacguccagccagaguuccugugcucuaggcgaGCAGACUCAGGAGGACUGCCgga
...(((...((((..((.(((((....(((((.....)))))))))).)).)))))))....

Structure

-aga   cac    ag  a     ccug     u 
    gca   gucc  cc gaguu    ugcuc a
    |||   ||||  || |||||    ||||| g
    CGU   CAGG  GG CUCAG    ACGag g
aggC   ---    -A  A     ----     c 

Annotation confidence Not enough data

Genome context

5: 32250067-32250128 [+]

Mature mmu-miR-12198-3p

• Accession: MIMAT0049865
• Description: Mus musculus mmu-miR-12198-3p mature miRNA
• Sequence: 40 - GCAGACUCAGGAGGACUGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973