miRBase entry: gga-mir-12213

Stem-loop gga-mir-12213


Accession
MI0040661
Description
Gallus gallus gga-mir-12213 precursor miRNA


Sequence

5 reads, 0 reads per million, 2 experiments
UGUGCACCAGCUGGUGGGUUGGAcuggaaaagaagccCUACAAACCACCUGGUGCUGGU
...(((((((.((((..((.((.((........)).)).))..)))).)))))))....

Structure
-UGU       C    GG  U  A  gga 
    GCACCAG UGGU  GU GG cu   a
    ||||||| ||||  || || ||    
    CGUGGUC ACCA  CA Cc ga   a
UGGU       C    AA  U  c  aga 


Annotation confidence Not enough data
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Genome context
chr1: 94675708-94675766 [+]

Database links

Mature gga-miR-12213-5p

Accession MIMAT0049892
Description Gallus gallus gga-miR-12213-5p mature miRNA
Sequence 1 - UGUGCACCAGCUGGUGGGUUGGA - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12213-3p

Accession MIMAT0049893
Description Gallus gallus gga-miR-12213-3p mature miRNA
Sequence 38 - CUACAAACCACCUGGUGCUGGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973