miRBase entry: gga-mir-12216

Stem-loop gga-mir-12216


Accession
MI0040666
Description
Gallus gallus gga-mir-12216 precursor miRNA


Sequence

1982 reads, 2.0 reads per million, 149 experiments
cggGCGGGGGCGCGGGGUGCUGAGCcguccuuuggggucucuccccgcgugggccuccccccgcUCAGCACCCCUCCGUCCCCGCAGU
...(((((((((.((((((((((((.((((..(((((.....)))))...))))........))))))))))))..)))))))))...

Structure
cgg         -C            -------c    -uu     u 
   GCGGGGGCG  GGGGUGCUGAGC        gucc   ugggg c
   |||||||||  ||||||||||||        ||||   ||||| u
   CGCCCCUGC  CCCCACGACUcg        cggg   gcccc c
UGA         CU            ccccccuc    ugc     u 


Annotation confidence High
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Genome context
10: 1356082-1356169 [+]

Database links

Mature gga-miR-12216-5p

Accession MIMAT0049901
Description Gallus gallus gga-miR-12216-5p mature miRNA
Sequence 4 - GCGGGGGCGCGGGGUGCUGAGC - 25
Evidence experimental
Illumina [1]

Mature gga-miR-12216-3p

Accession MIMAT0049902
Description Gallus gallus gga-miR-12216-3p mature miRNA
Sequence 65 - UCAGCACCCCUCCGUCCCCGCAGU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973