Stem-loop gga-mir-12218

Accession

MI0040670

Description

Gallus gallus gga-mir-12218 precursor miRNA

Sequence

5064 reads, 5.0 reads per million, 188 experiments

cUGGGCACAAAGAGGGCAGUGGGAGCagggagagccUCAUGCCCUCUCUGUGCCAGg
((((.((((.((((((((.((((.((.......)))))))))))))).)))))))).

Structure

-    G    A        G    A  ag 
 cUGG CACA AGAGGGCA UGGG GC  g
 |||| |||| |||||||| |||| ||  g
 GACC GUGU UCUCCCGU ACUc cg  a
g    -    C        -    -  ag 

Annotation confidence High

Genome context

10: 20136380-20136436 [-]

Mature gga-miR-12218-5p

• Accession: MIMAT0049908
• Description: Gallus gallus gga-miR-12218-5p mature miRNA
• Sequence: 2 - UGGGCACAAAGAGGGCAGUGGGAGC - 26
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12218-3p

• Accession: MIMAT0049909
• Description: Gallus gallus gga-miR-12218-3p mature miRNA
• Sequence: 37 - UCAUGCCCUCUCUGUGCCAG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973