Stem-loop gga-mir-425

Accession

MI0040676

Description

Gallus gallus gga-mir-425 precursor miRNA

Literature search

2 open access papers mention gga-mir-425
(2 sentences)

Sequence

90010 reads, 1141 reads per million, 5 experiments

AAUGACACGAUCACUCCCGCUGAgcgcgcagccacagagcCAUCGGGGAUGUCGUGUCUGUCc
...(((((((.((.(((((.((.((.(.........).)))).))))).))))))))).....

Structure

--AAU       U  C     C  A  g gca 
     GACACGA CA UCCCG UG gc c   g
     ||||||| || ||||| || || |   c
     CUGUGCU GU GGGGC AC cg g   c
cCUGU       -  A     U  -  a aca 

Annotation confidence Not enough data

Genome context

chr12: 11671363-11671425 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-425

Mature gga-miR-425-5p

• Accession: MIMAT0049919
• Description: Gallus gallus gga-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGCUGA - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-425-3p

• Accession: MIMAT0049920
• Description: Gallus gallus gga-miR-425-3p mature miRNA
• Sequence: 41 - CAUCGGGGAUGUCGUGUCUGUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973