Stem-loop gga-mir-12222

Accession

MI0040677

Description

Gallus gallus gga-mir-12222 precursor miRNA

Sequence

1042 reads, 69.0 reads per million, 19 experiments

UCUGCUUUGACCAGGUUGGGUGGCuggggacccugugaggcacaggcacccguGAUUGAAACCUGUUGCAUUG
..(((...(((.(((((.(((.((.(((...((((((...))))))..))))).)))..)))))))))))...

Structure

-UC   UUU   C     -G   G  u   gac      a 
   UGC   GAC AGGUU  GGU GC ggg   ccugug  
   |||   ||| |||||  ||| || |||   |||||| g
   ACG   UUG UCCAA  UUA ug ccc   ggacac  
GUU   ---   -     AG   G  -   -ac      g 

Annotation confidence Medium

Genome context

Z: 56762032-56762107 [-]

Mature gga-miR-12222-5p

• Accession: MIMAT0049921
• Description: Gallus gallus gga-miR-12222-5p mature miRNA
• Sequence: 1 - UCUGCUUUGACCAGGUUGGGUGGC - 24
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12222-3p

• Accession: MIMAT0049922
• Description: Gallus gallus gga-miR-12222-3p mature miRNA
• Sequence: 54 - GAUUGAAACCUGUUGCAUUG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973