miRBase entry: gga-mir-12224

Stem-loop gga-mir-12224


Accession
MI0040679
Description
Gallus gallus gga-mir-12224 precursor miRNA


Sequence

12 reads, 0 reads per million, 4 experiments
AACAGUGGAAUGCACCUAGCUGAgauggugggcuuucucUGUUAGGUGUCUUCCACAGGGca
....((((((.(((((((((.((((.((....)).)))).))))))))).))))))......

Structure
--AACA      U         U    u  u 
      GUGGAA GCACCUAGC GAga gg g
      |||||| ||||||||| |||| ||  
      CACCUU UGUGGAUUG cucu uc g
acGGGA      C         U    u  g 


Annotation confidence Not enough data
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Genome context
chr14: 4005590-4005651 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-12224
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-12224-5p

Accession MIMAT0049925
Description Gallus gallus gga-miR-12224-5p mature miRNA
Sequence 1 - AACAGUGGAAUGCACCUAGCUGA - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12224-3p

Accession MIMAT0049926
Description Gallus gallus gga-miR-12224-3p mature miRNA
Sequence 40 - UGUUAGGUGUCUUCCACAGGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973