Stem-loop gga-mir-12225

Accession

MI0040680

Description

Gallus gallus gga-mir-12225 precursor miRNA

Sequence

32 reads, 1 reads per million, 4 experiments

gACCUCACCCCGAUGGCGUAGCGgacgaccccggcgcgcUCCGCCUGCGGGAUGACGUCGC
(((.(((.((((..((((.((((..((....))...)))).))))..)))).))).)))..

Structure

--   C   C    AU    U    -ga  a 
  gAC UCA CCCG  GGCG AGCG   cg c
  ||| ||| ||||  |||| ||||   ||  
  CUG AGU GGGC  CCGC Ucgc   gc c
CG   C   A    GU    C    gcg  c 

Annotation confidence Not enough data

Genome context

chr14: 15022038-15022098 [-]

Mature gga-miR-12225-5p

• Accession: MIMAT0049927
• Description: Gallus gallus gga-miR-12225-5p mature miRNA
• Sequence: 2 - ACCUCACCCCGAUGGCGUAGCG - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12225-3p

• Accession: MIMAT0049928
• Description: Gallus gallus gga-miR-12225-3p mature miRNA
• Sequence: 40 - UCCGCCUGCGGGAUGACGUCGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973