Stem-loop gga-mir-12229

Accession

MI0040684

Description

Gallus gallus gga-mir-12229 precursor miRNA

Sequence

87 reads, 2 reads per million, 5 experiments

GAGCCGGGCCCCGCGGGGCUCCgucaguagcuuuuuuucuucgucgcccgGAGCCCCGCAGGCCCGGCCCGgc
(.((((((((..(((((((((((...((.((...........)).)).))))))))))).)))))))).)...

Structure

--- A        CC           uca  a  uuuu 
   G GCCGGGCC  GCGGGGCUCCg   gu gc    u
   | ||||||||  |||||||||||   || ||    u
   C CGGCCCGG  CGCCCCGAGgc   cg ug    u
cgG C        -A           --c  c  cuuc 

Annotation confidence Not enough data

Genome context

chr15: 9319318-9319390 [-]

Mature gga-miR-12229-5p

• Accession: MIMAT0049935
• Description: Gallus gallus gga-miR-12229-5p mature miRNA
• Sequence: 1 - GAGCCGGGCCCCGCGGGGCUCC - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12229-3p

• Accession: MIMAT0049936
• Description: Gallus gallus gga-miR-12229-3p mature miRNA
• Sequence: 51 - GAGCCCCGCAGGCCCGGCCCG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973