Stem-loop gga-mir-12230

Accession

MI0040685

Description

Gallus gallus gga-mir-12230 precursor miRNA

Sequence

194 reads, 1.0 reads per million, 65 experiments

AAAGUGGAUGAAGACACCAUGGagcugauccgggggccgGAUGGUGUCUGCAUCCGCUGCAa
..((((((((.(((((((((...(((........)))...))))))))).))))))))....

Structure

--AA        A         GGa   gau 
    AGUGGAUG AGACACCAU   gcu   c
    |||||||| |||||||||   |||    
    UCGCCUAC UCUGUGGUA   cgg   c
aACG        G         Ggc   ggg 

Annotation confidence Medium

Genome context

17: 5650831-5650892 [-]

Mature gga-miR-12230-5p

• Accession: MIMAT0049937
• Description: Gallus gallus gga-miR-12230-5p mature miRNA
• Sequence: 1 - AAAGUGGAUGAAGACACCAUGG - 22
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12230-3p

• Accession: MIMAT0051310
• Description: Gallus gallus gga-miR-12230-3p mature miRNA
• Sequence: 40 - GAUGGUGUCUGCAUCCGCUGCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973