miRBase entry: gga-mir-12231

Stem-loop gga-mir-12231


Accession
MI0040686
Description
Gallus gallus gga-mir-12231 precursor miRNA


Sequence

80 reads, 1.0 reads per million, 19 experiments
UGCUGUCCCCUGAGAGGAUCaugccugaggaguuuagcauguccuaugaacggAUCCUCUCAGAUGAACAGCUUcu
.((((((..(((((((((((....(..((((..........))))..)....)))))))))))..).)))))....

Structure
---U     - CC           augc ug    guuu 
    GCUGU C  CUGAGAGGAUC    c  agga    a
    ||||| |  |||||||||||    |  ||||     
    CGACA G  GACUCUCCUAg    g  uccu    g
ucUU     A UA           gcaa ua    guac 


Annotation confidence Not enough data
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Genome context
18: 1880816-1880891 [-]

Database links

Mature gga-miR-12231-5p

Accession MIMAT0049938
Description Gallus gallus gga-miR-12231-5p mature miRNA
Sequence 1 - UGCUGUCCCCUGAGAGGAUC - 20
Evidence experimental
Illumina [1]

Mature gga-miR-12231-3p

Accession MIMAT0049939
Description Gallus gallus gga-miR-12231-3p mature miRNA
Sequence 54 - AUCCUCUCAGAUGAACAGCUU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973