Stem-loop gga-mir-12233

Accession

MI0040688

Description

Gallus gallus gga-mir-12233 precursor miRNA

Sequence

320 reads, 2.0 reads per million, 87 experiments

GAGGGAACCGGUGGGGGGCACGGAcuccccguacggggaGUCCGUGCCCCCCCGGUUCCCUc
(((((((((((..(((((((((((((((((....))))))))))))))))))))))))))))

Structure

           UG                 g 
GAGGGAACCGG  GGGGGCACGGAcucccc u
|||||||||||  |||||||||||||||||  
cUCCCUUGGCC  CCCCCGUGCCUGagggg a
           --                 c 

Annotation confidence Medium

Genome context

19: 4654238-4654299 [-]

Mature gga-miR-12233-5p

• Accession: MIMAT0049942
• Description: Gallus gallus gga-miR-12233-5p mature miRNA
• Sequence: 1 - GAGGGAACCGGUGGGGGGCACGGA - 24
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12233-3p

• Accession: MIMAT0049943
• Description: Gallus gallus gga-miR-12233-3p mature miRNA
• Sequence: 40 - GUCCGUGCCCCCCCGGUUCCCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973