miRBase entry: gga-mir-2184a

Stem-loop gga-mir-2184a


Accession
MI0040691
Description
Gallus gallus gga-mir-2184a precursor miRNA


Sequence

33152 reads, 418 reads per million, 5 experiments
AACAGUAAGAGUUGAUGUGCGGcgaacgcagccuGCAUGUGAGCUCCUACUGCCGC
..(((((.(((((.(((((((((.......))).)))))).))))).)))))....

Structure
--AA     A     G      -   ga 
    CAGUA GAGUU AUGUGC GGc  a
    ||||| ||||| |||||| |||  c
    GUCAU CUCGA UGUACG ccg  g
CGCC     C     G      u   ac 


Annotation confidence Not enough data
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Genome context
chr19: 5515026-5515081 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from gga-mir-2184a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-2184a-5p

Accession MIMAT0049948
Description Gallus gallus gga-miR-2184a-5p mature miRNA
Sequence 1 - AACAGUAAGAGUUGAUGUGCGG - 22
Evidence experimental
Illumina [1]

Mature gga-miR-2184a-3p

Accession MIMAT0049949
Description Gallus gallus gga-miR-2184a-3p mature miRNA
Sequence 35 - GCAUGUGAGCUCCUACUGCCGC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973