Stem-loop gga-mir-12239

Accession

MI0040701

Description

Gallus gallus gga-mir-12239 precursor miRNA

Sequence

104 reads, 3 reads per million, 5 experiments

AUGUUGCUGGAAGGAGCAGAggacaugugaggucUCUGCUGCUUUCUGCUGGCAUCA
(((((((.(((((.(((((((..(......)..))))))).))))).)).)))))..

Structure

--     -  U     G       ga au 
  AUGUU GC GGAAG AGCAGAg  c  g
  ||||| || ||||| |||||||  |   
  UACGG CG CUUUC UCGUCUc  g  u
AC     U  U     G       ug ag 

Annotation confidence Not enough data

Genome context

chr2: 6407952-6408008 [-]

Mature gga-miR-12239-5p

• Accession: MIMAT0049967
• Description: Gallus gallus gga-miR-12239-5p mature miRNA
• Sequence: 1 - AUGUUGCUGGAAGGAGCAGA - 20
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12239-3p

• Accession: MIMAT0049968
• Description: Gallus gallus gga-miR-12239-3p mature miRNA
• Sequence: 35 - UCUGCUGCUUUCUGCUGGCAUCA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973