Stem-loop gga-mir-12243

Accession

MI0040706

Description

Gallus gallus gga-mir-12243 precursor miRNA

Sequence

34 reads, 2 reads per million, 5 experiments

UUCAUCCUCCUCAUCUUCGUCCUUGCcuucugcuuguaccgcAGGAAGAAGAGGGGAGGGGAGCa
(((.((((((((.(((((.((((.((...(.....)....)))))).))))))))))))))))..

Structure

--   A        A     G    U  -cuu u 
  UUC UCCUCCUC UCUUC UCCU GC    c g
  ||| |||||||| ||||| |||| ||    | c
  GAG GGGAGGGG AGAAG AGGA cg    g u
aC   -        -     A    -  ccau u 

Annotation confidence Not enough data

Genome context

chr20: 10004105-10004169 [-]

Mature gga-miR-12243-5p

• Accession: MIMAT0049976
• Description: Gallus gallus gga-miR-12243-5p mature miRNA
• Sequence: 1 - UUCAUCCUCCUCAUCUUCGUCCUUGC - 26
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12243-3p

• Accession: MIMAT0049977
• Description: Gallus gallus gga-miR-12243-3p mature miRNA
• Sequence: 43 - AGGAAGAAGAGGGGAGGGGAGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973