miRBase entry: gga-mir-12245

Stem-loop gga-mir-12245


Accession
MI0040708
Description
Gallus gallus gga-mir-12245 precursor miRNA


Sequence

29 reads, 0 reads per million, 5 experiments
AGGGGCCGCGAUGGGAGGGGGUUguucgacgugaCCCCGCCCCGCCCGGCCCCGCC
.(((((((.(.((((..((((((.........))))))..)))).))))))))...

Structure
--A       C A    AG      guu 
   GGGGCCG G UGGG  GGGGUU   c
   ||||||| | ||||  ||||||   g
   CCCCGGC C GCCC  CCCCag   a
CCG       - C    CG      ugc 


Annotation confidence Not enough data
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Genome context
chr20: 10780065-10780120 [+]

Database links

Mature gga-miR-12245-5p

Accession MIMAT0049979
Description Gallus gallus gga-miR-12245-5p mature miRNA
Sequence 1 - AGGGGCCGCGAUGGGAGGGGGUU - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12245-3p

Accession MIMAT0049980
Description Gallus gallus gga-miR-12245-3p mature miRNA
Sequence 35 - CCCCGCCCCGCCCGGCCCCGCC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973