Stem-loop gga-mir-12248

Accession

MI0040712

Description

Gallus gallus gga-mir-12248 precursor miRNA

Sequence

UCAGCCCAUUUGUCCUCAUGCCUggaacugugcaGGUACGGACAUGGGGGCUUUGG
..(((((...(((((...((((((........)))))).)))))...)))))....

Structure

--UC     AUU     UCA      gaa 
    AGCCC   UGUCC   UGCCUg   c
    |||||   |||||   ||||||    
    UCGGG   ACAGG   AUGGac   u
GGUU     GGU     --C      gug 

Annotation confidence Not enough data

Genome context

chr23: 4355778-4355833 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from gga-mir-12248

Mature gga-miR-12248-5p

• Accession: MIMAT0049985
• Description: Gallus gallus gga-miR-12248-5p mature miRNA
• Sequence: 1 - UCAGCCCAUUUGUCCUCAUGCCU - 23
• Evidence: experimental ; Illumina [1]

Mature gga-miR-12248-3p

• Accession: MIMAT0049986
• Description: Gallus gallus gga-miR-12248-3p mature miRNA
• Sequence: 35 - GGUACGGACAUGGGGGCUUUGG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973