miRBase entry: gga-mir-12249

Stem-loop gga-mir-12249


Accession
MI0040713
Description
Gallus gallus gga-mir-12249 precursor miRNA


Sequence

2 reads, 2 reads per million, 1 experiments
GUGAGUAAUGGGAGAGGGUCCcuggggcaccucggccaggACCCCAUCCCUCAGCCUCACCCC
(((((....((((..(((((((((((....)))))...))))))..)))).....)))))...

Structure
---     -UAAU    GA      ---     g 
   GUGAG     GGGA  GGGUCC   cuggg c
   |||||     ||||  ||||||   |||||  
   CACUC     CCCU  CCCAgg   ggcuc a
CCC     CGACU    AC      acc     c 


Annotation confidence Not enough data
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Genome context
chr24: 450652-450714 [+]

Database links

Mature gga-miR-12249-5p

Accession MIMAT0049987
Description Gallus gallus gga-miR-12249-5p mature miRNA
Sequence 1 - GUGAGUAAUGGGAGAGGGUCC - 21
Evidence experimental
Illumina [1]

Mature gga-miR-12249-3p

Accession MIMAT0049988
Description Gallus gallus gga-miR-12249-3p mature miRNA
Sequence 41 - ACCCCAUCCCUCAGCCUCACCCC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973